PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0544.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WOX
Protein Properties Length: 302aa    MW: 33523.9 Da    PI: 9.7761
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0544.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.37.2e-2061120357
                          --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                          +R+++ + q+++Lee+++   r+p+a +++++A++l    +++ ++V++WFqN++a+e++
  Kaladp0039s0544.1.p  61 TRWNPAPGQIQALEEMYRCgLRTPTALQIQQIASQLrkfgKIEGKNVFYWFQNHKARERQ 120
                          7*****************99**************************************97 PP
2Wus_type_Homeobox108.73.4e-3560122365
    Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                           tRW+P p Qi+ Lee+y++GlrtP++ +iq+i+++L+++Gkie+kNVfyWFQN+kaRerqk+
  Kaladp0039s0544.1.p  60 GTRWNPAPGQIQALEEMYRCGLRTPTALQIQQIASQLRKFGKIEGKNVFYWFQNHKARERQKR 122
                          68***********************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MVGFCSGIDL GNICDSRKLL GLTASSSSST KTSGVHSVIA VDHQMDKKEL NESVQTLGTG  60
TRWNPAPGQI QALEEMYRCG LRTPTALQIQ QIASQLRKFG KIEGKNVFYW FQNHKARERQ  120
KRCREFKSPA SKQPKPTVPS LQQQCCSQAM KSRKDSPLAM KRNCAEQNSN SSWGHSTSHS  180
LTLSRESVMY MHMQRAAAVV SHGSKQSVAD GEATVGSRRH AATWQVVQWS PAHLHILHPL  240
EFIASNNLAQ FNGVTVREDG AGEVETLQLF PTRNEECWSE ARVDQRGAKN ISTPVHFFQF  300
L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.16e-29WOX family protein