PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0544.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WOX
Protein Properties Length: 258aa    MW: 29061.8 Da    PI: 10.1159
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0544.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.75.5e-201776357
                         --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                         +R+++ + q+++Lee+++   r+p+a +++++A++l    +++ ++V++WFqN++a+e++
  Kaladp0039s0544.2.p 17 TRWNPAPGQIQALEEMYRCgLRTPTALQIQQIASQLrkfgKIEGKNVFYWFQNHKARERQ 76
                         7*****************99**************************************97 PP
2Wus_type_Homeobox109.12.6e-351678365
    Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                          tRW+P p Qi+ Lee+y++GlrtP++ +iq+i+++L+++Gkie+kNVfyWFQN+kaRerqk+
  Kaladp0039s0544.2.p 16 GTRWNPAPGQIQALEEMYRCGLRTPTALQIQQIASQLRKFGKIEGKNVFYWFQNHKARERQKR 78
                         68***********************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MDKKELNESV QTLGTGTRWN PAPGQIQALE EMYRCGLRTP TALQIQQIAS QLRKFGKIEG  60
KNVFYWFQNH KARERQKRCR EFKSPASKQP KPTVPSLQQQ CCSQAMKSRK DSPLAMKRNC  120
AEQNSNSSWG HSTSHSLTLS RESVMYMHMQ RAAAVVSHGS KQSVADGEAT VGSRRHAATW  180
QVVQWSPAHL HILHPLEFIA SNNLAQFNGV TVREDGAGEV ETLQLFPTRN EECWSEARVD  240
QRGAKNISTP VHFFQFL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.15e-29WOX family protein