PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0592.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 363aa    MW: 41091.1 Da    PI: 5.0458
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0592.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH185.3e-0689112226
                          -S---SGGGGTS--TTTTT-SS-SS CS
              zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                          k  lC ff + G+C  G +CkF+H+
  Kaladp0039s0592.1.p  89 KSILCEFFKA-GQCAKGFKCKFSHD 112
                          6679**7777.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MPPKQAKADI AKKQKQVEDK TFGLKNKNKS KNVQKYVQSL NQSVQPKVDP SKVAAKKKKE  60
EEKAREKELN ELFKVAISQP KVPPGVDPKS ILCEFFKAGQ CAKGFKCKFS HDLNIQRKGE  120
KIDIYSDKRD DETMEDWDQE TLEKVVASKG KEYNQNKPTE IVCKYFLDAV EKKQYGWFWV  180
CPNGGKECHY RHALPPGYIL KSQMKALLEE ERDRIPIEEE IENQRSKVAT TTPMTPELFY  240
QWKKKKVDEK EAGIAAQRAD RAKNDRMSGR ELFLSDASLF VDDAEAYDNY QREEQPESGE  300
QKAQESSVAA AGPSSSAHAV DEPADDIPDV DVDDDDELDL DELNELEASL SKSSIHIQEP  360
GA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20280.11e-144C3H family protein