PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0018.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GATA

Protein Properties

Length: 176aa MW: 19895.6 Da PI: 9.8522

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0018.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	53.6	3e-17	41	74	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C C+tt TplWR gp g+++LCnaCG+++rk++ Kaladp0040s0018.1.p 41 CMECNTTRTPLWRGGPAGPRSLCNACGIRHRKRK 74 999*****************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MCEGSGKLRD VSDSEFPTRN TNSMIMMESS SSSSSQFRRT CMECNTTRTP LWRGGPAGPR 60 SLCNACGIRH RKRKRDHSSL ITTSDDRSKD KKLKYKNKRK SSNDGTGRKG SLSMRLMGLV 120 DGEIRKLREE EEAAILLMAL SYGYGMDLPR VREIHFQSAP IEAYYKEEDD FIKLP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	94	RKRKRDHSSLITTSDDRSKDKKLK
2	71	100	RKRKRDHSSLITTSDDRSKDKKLKYKNKRK
3	72	96	KRKRDHSSLITTSDDRSKDKKLKYK
4	72	101	RKRKRDHSSLITTSDDRSKDKKLKYKNKRK
5	73	96	RKRKRDHSSLITTSDDRSKDKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49300.1	1e-18	GATA family protein