PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0052.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 199aa    MW: 22391.6 Da    PI: 10.0163
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0052.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.36.4e-0684106123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C++C+k F r  nL+ H r H
  Kaladp0040s0052.1.p  84 FVCEICSKGFQRDQNLQLHRRGH 106
                          89*******************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MFSSKLPNFS EEAAAPASVS SSDKINIAHH HEFGTLNPSS SQIPSTNLDQ PVKTKKKRNL  60
PGNPDPDAEV IALSPKTLLA TNRFVCEICS KGFQRDQNLQ LHRRGHNLPW KLKQRSSNDV  120
VRKRAYVCPE PTCVHHHPSR ALGDLTGIKK HFCRKHGEKK WKCEKCCKIY AVQSDWKAHS  180
KTCGTREYRC DCGTLFSR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03840.18e-86C2H2 family protein