PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0065.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 211aa    MW: 23599.5 Da    PI: 9.3079
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0065.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.33.7e-0539791155
                         HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                          RR++i +++  L++++P +    +k   Ka +L + ++Y++ Lq
  Kaladp0040s0065.1.p 39 VRREKIGQRMRILQDVVPGC----NKITGKAGMLDEIINYVQVLQ 79
                         6*******************....999**************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MGARNHDRRQ ANFQSDFNTR HLQRQRRLFQ AANCFCVQVR REKIGQRMRI LQDVVPGCNK  60
ITGKAGMLDE IINYVQVLQR QVEFLSMKLA TVTIAHDFNN IINIPSAVHT GVAVTDAISH  120
AHLFFNQSYA SNITETGQNS FDTARGSTMS TPTSVHKYFL DAAGFTPPLT WNPDFQAVPG  180
QTFHQSRSGT FSSHPPEADT TSMSNQFTMF *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.13e-29bHLH family protein