PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0084.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 261aa    MW: 28130.1 Da    PI: 5.3563
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0084.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.22.9e-13208253655
                          HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +++Er RR ri +++ +L++l+P+     +k  + a++L +AveY+k+Lq
  Kaladp0040s0084.3.p 208 SIAERVRRTRISDRIRKLQDLVPNM----DKQTNTADMLDEAVEYVKYLQ 253
                          689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MQPTPGGSSS SSGDGGLSRG RLARFRSAPA SWLEALLEDD DEGEGVDDSL DALKPTETLT  60
QLLSSSNPIT SSPAVSSLRN SCGVDVAGAD PGLFEPSNAA FLRQNSSPAD LFAGGYDGPF  120
SNYSMSSAGY DYLSTPPPTA AKRLRDHPNS QHQHYSATFS AQLKGEQSSG HLQGGVSSYL  180
DLDMDKLLED SVPCRVRAKR GCATHPRSIA ERVRRTRISD RIRKLQDLVP NMDKQTNTAD  240
MLDEAVEYVK YLQKQIQYLV *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.13e-59bHLH family protein