PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0157.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CAMTA

Protein Properties

Length: 900aa MW: 100333 Da PI: 6.0583

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0157.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	148.7	1.4e-46	12	127	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseen 91 +e + rwlk+ e++ i++n e +l ++++++p+sg+++Lyn++++r+fr DG++w+kk+dg+tv E+he+LKv++ve+l+cyYa++een Kaladp0040s0157.2.p 12 REaEVRWLKPAEVYYIIQNCEDRHLRSKSAKKPPSGTFFLYNKRVLRNFRGDGHNWRKKRDGRTVGEAHERLKVDNVEALNCYYARGEEN 101 55589***************999************************************************************* PP CG-1 92 ptfqrrcywlLeeelekivlvhylev 117 ++f+rr++w+L e+++ivlv+yl+v Kaladp0040s0157.2.p 102 SSFRRRSFWMLSGERSHIVLVQYLDV 127 *********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 900 aa Download sequence
MQSEFDINEL VREAEVRWLK PAEVYYIIQN CEDRHLRSKS AKKPPSGTFF LYNKRVLRNF 60 RGDGHNWRKK RDGRTVGEAH ERLKVDNVEA LNCYYARGEE NSSFRRRSFW MLSGERSHIV 120 LVQYLDVANQ SPGSVSQPSF LLSPPSSLSP GISSATNQEF VSVSGGYDSN INLPSPVSAE 180 IGFEVGISNY MVEVNQASGH LEKQLSLNYE NLNGINSLSS PEGMLNSSNF EGYGMEIADQ 240 VWLDSLLDGS DYAACDGDSG MGRQQTSGRD EDCVSWTDVE NFGEDEQISL ELHEMFPLNT 300 DRFEGPPFSS FTSSQQRNLG YQGKYFETDQ TLIQPQANSN LFIDQNQKFT IRDVSPEWGY 360 SFETTKVIIV GSFLCHPSEH VWTCMFGDIE VPVEIIQEGV ILCEAPPNPS GKLTLCVTSG 420 NRETCSEVRE FEYRNKTGIC AQCSASKKET TMSSEELLLL VRLAQMLLCD YSLGQRGGDS 480 KELGNGLSEK RNSDEDSWSL ILESLLVGSG TFAGTLYWLL EEFLKEKLVR WISSKTQEPT 540 GESTCLLSRK EQGIIHMIAG LGYEWALAPI LSSGVGINFR DINGWTALHW AARFGREKMV 600 ACLIASGALA GALTDPNVQD PTGKTAASIA AINGHKGLAG YLSEVALTSH LSSLKLQESE 660 LSKELAVSEA EHTVNCIAEA NMNTTEDQLS LNDTLTAVRN AASAAARIQA AFRAHSFRKR 720 QQEKASKTIS IDDYGISSDV QVLSAVSKLA FRNTRDHNSA ALSIQKKYRG YKGRKEFLDF 780 RQKVVKIQAH VRGHQTRKNY KVCWAAGILE KIILRWLRKG VGLRGFKPEL ETIDESDEED 840 FAKVFRKKNV EAALEEAVAR VLSMVASPEA RQQYRRMLER YRQAKAHLGN AANERLQHL*

Sequence ? help Back to Top

Protein Sequence Length: 900 aa Download sequence

MQSEFDINEL VREAEVRWLK PAEVYYIIQN CEDRHLRSKS AKKPPSGTFF LYNKRVLRNF  60
RGDGHNWRKK RDGRTVGEAH ERLKVDNVEA LNCYYARGEE NSSFRRRSFW MLSGERSHIV  120
LVQYLDVANQ SPGSVSQPSF LLSPPSSLSP GISSATNQEF VSVSGGYDSN INLPSPVSAE  180
IGFEVGISNY MVEVNQASGH LEKQLSLNYE NLNGINSLSS PEGMLNSSNF EGYGMEIADQ  240
VWLDSLLDGS DYAACDGDSG MGRQQTSGRD EDCVSWTDVE NFGEDEQISL ELHEMFPLNT  300
DRFEGPPFSS FTSSQQRNLG YQGKYFETDQ TLIQPQANSN LFIDQNQKFT IRDVSPEWGY  360
SFETTKVIIV GSFLCHPSEH VWTCMFGDIE VPVEIIQEGV ILCEAPPNPS GKLTLCVTSG  420
NRETCSEVRE FEYRNKTGIC AQCSASKKET TMSSEELLLL VRLAQMLLCD YSLGQRGGDS  480
KELGNGLSEK RNSDEDSWSL ILESLLVGSG TFAGTLYWLL EEFLKEKLVR WISSKTQEPT  540
GESTCLLSRK EQGIIHMIAG LGYEWALAPI LSSGVGINFR DINGWTALHW AARFGREKMV  600
ACLIASGALA GALTDPNVQD PTGKTAASIA AINGHKGLAG YLSEVALTSH LSSLKLQESE  660
LSKELAVSEA EHTVNCIAEA NMNTTEDQLS LNDTLTAVRN AASAAARIQA AFRAHSFRKR  720
QQEKASKTIS IDDYGISSDV QVLSAVSKLA FRNTRDHNSA ALSIQKKYRG YKGRKEFLDF  780
RQKVVKIQAH VRGHQTRKNY KVCWAAGILE KIILRWLRKG VGLRGFKPEL ETIDESDEED  840
FAKVFRKKNV EAALEEAVAR VLSMVASPEA RQQYRRMLER YRQAKAHLGN AANERLQHL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein