PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0176.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 509aa MW: 56351.1 Da PI: 7.1778

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0176.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.1	1.3e-10	230	286	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++ r++A+++d s++ rk + g ++ +++Aa+a++ a++k++g Kaladp0040s0176.1.p 230 SIYRGVTRHRWTMRYEAHLWDNSSRRegqARKGRQ-GGYDKEDKAARAYDLAALKYWG 286 57*****************77744454336655.7799999***********98 PP
2	AP2	50.3	6.1e-16	329	380	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Kaladp0040s0176.1.p 329 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFPTEEEAAEAYDIAAIKFRG 380 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MEAAPNQSNL LAFSLYPTMN MVTSADEPSR NRHSRQLHQT QQPEQHQNNH FISYAAASSD 60 ASCPQYFFDN LYANGYSYSK PQMSFQPTGA PDPLPWLSTS VSEPKLENLL DSSSMARYAE 120 SQTETQNDSG LTVYEQGSGS AGYFSQASAQ LVQTNSGSEV VDSGSLNQVV TVASHHHHHQ 180 LAELAVSNSH AQNNQNLSNR ELMQVEERSV VAPQVDTSRK VSDTFGQRTS IYRGVTRHRW 240 TMRYEAHLWD NSSRREGQAR KGRQGGYDKE DKAARAYDLA ALKYWGPTAV TNFPVSNYAK 300 ELEEMTSMTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT 360 FPTEEEAAEA YDIAAIKFRG TNAVTNFEMS RYDVAAITKA TLPIGGAARR LKSPPESEVS 420 LALDEPRLQN PTNNISFSLT QPLSAIPCGV PFDTVSSLYQ HNFYHQLQSS HAAAMAVPEP 480 RTSIGAPTGP INFLPNSGDF YAWPHQSY*

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MEAAPNQSNL LAFSLYPTMN MVTSADEPSR NRHSRQLHQT QQPEQHQNNH FISYAAASSD  60
ASCPQYFFDN LYANGYSYSK PQMSFQPTGA PDPLPWLSTS VSEPKLENLL DSSSMARYAE  120
SQTETQNDSG LTVYEQGSGS AGYFSQASAQ LVQTNSGSEV VDSGSLNQVV TVASHHHHHQ  180
LAELAVSNSH AQNNQNLSNR ELMQVEERSV VAPQVDTSRK VSDTFGQRTS IYRGVTRHRW  240
TMRYEAHLWD NSSRREGQAR KGRQGGYDKE DKAARAYDLA ALKYWGPTAV TNFPVSNYAK  300
ELEEMTSMTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT  360
FPTEEEAAEA YDIAAIKFRG TNAVTNFEMS RYDVAAITKA TLPIGGAARR LKSPPESEVS  420
LALDEPRLQN PTNNISFSLT QPLSAIPCGV PFDTVSSLYQ HNFYHQLQSS HAAAMAVPEP  480
RTSIGAPTGP INFLPNSGDF YAWPHQSY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65510.1	1e-127	AP2 family protein