PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0190.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 225aa    MW: 25634.4 Da    PI: 10.2583
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0190.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.25.3e-291059251
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         ri+n++ rqvtfskRr+g+lKKA+ELS+LCdaev +iifsstg+lye+ss
  Kaladp0040s0190.1.p 10 RIDNSTSRQVTFSKRRKGLLKKAKELSILCDAEVGLIIFSSTGRLYEFSS 59
                         8***********************************************96 PP
2K-box836.6e-28821701098
                K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                           +++++ +q+e+a  ++++enLq ++R+l+Ge ++ + + eLq Le+qLe slk +R kK+ell++qi+el++k  + ++en +L +k 
  Kaladp0040s0190.1.p  82 PTTEMKFWQTEAAMFRQQLENLQDKHRQLMGEAINGMGIHELQALENQLEMSLKGVRMKKHELLTDQIRELREKGSRKHQENLELCRKA 170
                          567899*****************************************************************************999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRKGLLK KAKELSILCD AEVGLIIFSS TGRLYEFSST  60
SMKSVIERYN RSKGEGFQLL NPTTEMKFWQ TEAAMFRQQL ENLQDKHRQL MGEAINGMGI  120
HELQALENQL EMSLKGVRMK KHELLTDQIR ELREKGSRKH QENLELCRKA NQVITRDEST  180
EPPARARVDG TTREAPGADT LLAPLTLRPS SAEEVRSYHT YISL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.14e-87MIKC_MADS family protein