PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0209.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 252aa    MW: 28061.9 Da    PI: 9.5979
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0209.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.62.5e-19113167256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ +++k+q ++Lee F+++++++ ++++ LA++l+L+ rqV vWFqNrRa+ k
  Kaladp0040s0209.1.p 113 RKKLRLKKDQAQVLEERFKQQSTLNPKQKQALARQLNLSPRQVEVWFQNRRARTK 167
                          6778899**********************************************98 PP
2HD-ZIP_I/II116.51.6e-37113203192
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+rl+k+q+++LEe F+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E dye+Lk+++++l+een+rL ke +eL+ +
  Kaladp0040s0209.1.p 113 RKKLRLKKDQAQVLEERFKQQSTLNPKQKQALARQLNLSPRQVEVWFQNRRARTKLKQTELDYEYLKKCCETLTEENRRLIKELKELK-A 201
                          69*************************************************************************************9.6 PP

          HD-ZIP_I/II  91 lk 92 
                          lk
  Kaladp0040s0209.1.p 202 LK 203
                          65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MDHHGRGDLG LNLKLGSELV DHRPRSITHV KRNYQTAMRP CFELPLLSLG LGLDGGGGQV  60
DQGAVVKPGV KGRDGETSGQ STVSSFSNSG LSVMRERSYE DEDYNCFSND GVRKKLRLKK  120
DQAQVLEERF KQQSTLNPKQ KQALARQLNL SPRQVEVWFQ NRRARTKLKQ TELDYEYLKK  180
CCETLTEENR RLIKELKELK ALKQAQPNCV KLPAATLSIC PSCECVTTTP ARGGDCPSKS  240
KFFNSAPSAA Y*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162170RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.17e-45HD-ZIP family protein