PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0245.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 260aa    MW: 27143.2 Da    PI: 8.7141
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0245.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.11e-05140185454
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          ah +  r R +++ +++++L++l+ +      +K + a++L +A+ YIk L
  Kaladp0040s0245.1.p 140 AHAAKPRPRKEKLGERIATLQQLVSPF-----GKTDTASVLHEAMSYIKFL 185
                          68888899999**************98.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MADDDRPEPR SFYQLLFSDP IVTLNTSKAA ADVTGPDYSE SFYGPNPPKM LCFGAYQKEE  60
EAICSEITAA ALRQMVSQSD SSSTSSGNRH NSSSGKSSTA EPKPNPNRKR TGSGRNPVGG  120
GASAEGKKTR SEKPAAAAPA HAAKPRPRKE KLGERIATLQ QLVSPFGKTD TASVLHEAMS  180
YIKFLHDQVQ VLSSPYLHSS PNQGGGDGGA VGLRSRGLCL VPVSCTAQVD GSTNGADFWA  240
PAAGINISSC VNLASSTKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.17e-38bHLH family protein