PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0265.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 237aa    MW: 25321.5 Da    PI: 9.6057
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0265.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.00027140162123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C++C++sF++   L  H r+H
  Kaladp0040s0265.1.p 140 HECSICHRSFPTGQALGGHKRLH 162
                          78*****************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MALEALNSPS TAHQLRFEEP EHHLFDKMSK GKRSKRSRSE ISNGNSAEEE YLAWCLIMLA  60
RGVSGRSETV KKQTTTPKPQ PLAAALILSH KCSVCHKAFP SHQALGGHKA SHRKNTASPD  120
NDSAASIVTV AALPPGARSH ECSICHRSFP TGQALGGHKR LHYDGGNSSS SAVATTSSDG  180
AAGPSRGFDL NLPALPDMRS IIGVNMKKSQ WAVEEEVESP HPSKKPRMFD VGLGQQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-35C2H2 family protein