PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0283.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 214aa    MW: 23670.7 Da    PI: 8.2251
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0283.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF68.28.1e-221763349
                         --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
               SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                         i+ k   qvtfskRr g++KKA+EL++LC++e+a+i+fs+ gk + +
  Kaladp0040s0283.1.p 17 IQKKNHLQVTFSKRRSGLFKKASELCTLCGVEIAIIVFSPAGKAFSF 63
                         7788889***********************************97766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MAKKTSLGRQ RIEITKIQKK NHLQVTFSKR RSGLFKKASE LCTLCGVEIA IIVFSPAGKA  60
FSFGHPNVES IIQKYLDHPS GAAADAHPTS ATRELNNQLT QVTSELEAER KKSEAFTNLR  120
SSNAGQFWWE APVEEMGWEE LEQLRHWLSQ LKRSVAMAIS VQAESFTTTS SATGFGNYLF  180
GNLFEDKASD MLLAAVESTS ALTYNYGYGN AFF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.11e-52M-type_MADS family protein