PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0359.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 728aa    MW: 79855.6 Da    PI: 6.1533
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0359.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.94.8e-2058113156
                          TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          +++ +++t+ q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  Kaladp0040s0359.1.p  58 KKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 113
                          688999***********************************************998 PP
2START217.74e-682444641206
                          HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S.... CS
                START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla.... 77 
                          ela +a++el+++a+a++p+W  s+    e++ ++e+l++f+++ +      ++ea+r+s+vv+m++ +lve+l+d++ qW+  +     
  Kaladp0040s0359.1.p 244 ELAVAAMEELIRMAQAGDPLWIPSAdnstEILCEEEYLRTFPRGIGpkplgLKSEASRESAVVIMNHINLVEILMDVN-QWSSIFSgivs 332
                          57899********************99999999**********999********************************.*********** PP

                          EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTC CS
                START  78 kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksng 160
                          +a+tlev+s+g      galq+++ae+q++splvp R+ +fvRy++q+++g+w++vdvS+ds ++ p    v R++++pSg+li++++ng
  Kaladp0040s0359.1.p 333 RAMTLEVLSTGvagnynGALQVITAEFQVPSPLVPtRENYFVRYCKQHPDGTWAVVDVSLDSLRPSP----VTRSRRRPSGCLIQEMPNG 418
                          *****************************************************************98....7****************** PP

                          EEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                START 161 hskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                          +skvtwvehv+ ++r +h+++r+lv+s +a+gak+wvatl+rqce+
  Kaladp0040s0359.1.p 419 YSKVTWVEHVEADDRGVHNIYRPLVNSNHAFGAKRWVATLDRQCER 464
                          ********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    
MYQPNLFVDT SHHLLLDMGH SKTPDNELGS LRDEDFESKS GTEAQSGDEQ DPNQRPKKKR  60
YHRHTQRQIQ EMEAFFKECP HPDDKQRKEL SRELGLEPLQ VKFWFQNKRT QMKGQHERHE  120
NSQLRAENEK LRADNMRYKE ALGNATCPNC GGPAAIGEMS FDEQHLRIEN ARLREEIDRI  180
SGIAAKYIGK PLVTYPHLPS RPSLEIGVGN FGPGGMAEGD MFGVSDLLRS VSGPTEADKP  240
IIIELAVAAM EELIRMAQAG DPLWIPSADN STEILCEEEY LRTFPRGIGP KPLGLKSEAS  300
RESAVVIMNH INLVEILMDV NQWSSIFSGI VSRAMTLEVL STGVAGNYNG ALQVITAEFQ  360
VPSPLVPTRE NYFVRYCKQH PDGTWAVVDV SLDSLRPSPV TRSRRRPSGC LIQEMPNGYS  420
KVTWVEHVEA DDRGVHNIYR PLVNSNHAFG AKRWVATLDR QCERLASLMA SNINTGDVGV  480
ITRPDGRKSM LKLAERMVMS FCGGVGASTA HTWTTLSGTS ADDVRVMTRK SMDDPGRPPG  540
IVLSAATSFW IPVSSKRVFD FLRDENSRNE WDILSNGGLV QEMAHIANGR DPGNCVSLLR  600
VNSANSSQSN MLILQESSTD VTGSYVIYAP VDIVAMNVVL NGGDPDYVAL LPSGFAILPD  660
NGLSSLAPIV GQHGVLDVGS GGSLLTVAFQ ILVDSIPTAK LSLGSVATVN SLIKCTVERI  720
KAALSCP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein