PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0399.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 164aa    MW: 17350.5 Da    PI: 7.9694
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0399.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260138.91.7e-4318116199
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          +CaaCk+lrrkC ++C++apyfp e+p kfanvhk+FGasnv+kll+++++++reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l
  Kaladp0040s0399.3.p  18 PCAACKFLRRKCLPGCTFAPYFPPEEPTKFANVHKIFGASNVSKLLNEISPHQREDAVNSLAYEAEARIKDPVYGCVGSISVLQRQVLKL 107
                          7***************************************************************************************** PP

               DUF260  91 kaelallke 99 
                          ++el+++++
  Kaladp0040s0399.3.p 108 QKELEATNA 116
                          ****99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MASSSSSSPS PCYYSNSPCA ACKFLRRKCL PGCTFAPYFP PEEPTKFANV HKIFGASNVS  60
KLLNEISPHQ REDAVNSLAY EAEARIKDPV YGCVGSISVL QRQVLKLQKE LEATNADLMR  120
YACDGSLAGV LGTGSGSRVS DGSSSASFDQ GSGCFVRFSS SNP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27650.11e-65LBD family protein