PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0411.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 232aa MW: 26088.1 Da PI: 9.6062

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0411.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2.1e-18	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +l ++v+ +G+g+W++Ia++ g++R++k+c++rw +yl Kaladp0040s0411.1.p 16 RGLWTEEEDRILMEYVEVHGKGHWNRIAKKTGLKRCGKSCRLRWVNYL 63 788*******************************************97 PP
2	Myb_DNA-binding	58.4	1.6e-18	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++l+++++k+lG++ W++Ia +++ gRt++q+k++w+++l Kaladp0040s0411.1.p 69 RGSFTEQEEDLIIRLHKLLGNR-WSLIAGRVP-GRTDNQVKNYWNTHL 114 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MEAAGGGGGG SRQYRRGLWT EEEDRILMEY VEVHGKGHWN RIAKKTGLKR CGKSCRLRWV 60 NYLSPNVKRG SFTEQEEDLI IRLHKLLGNR WSLIAGRVPG RTDNQVKNYW NTHLSKRNGC 120 AKRQRTESYA VNPDTKSAAC SKNSETVTTG SFISLDPRKD KTGSTTENTE KETAAATARE 180 NHLISVASLP QIAGASWREQ MNSSYESLMQ FSDEFLQFDF GWNNLSSLFS D*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	1e-71	MYB family protein