PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0439.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 356aa MW: 39001.2 Da PI: 6.5114

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0439.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	5.8e-18	33	80	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +v+q+G +W+++++ g+ R+ k+c++rw +yl Kaladp0040s0439.1.p 33 KGPWTPEEDIILVSYVQQHGASNWRAVPANAGLLRCSKSCRLRWTNYL 80 79****************************99**********97 PP
2	Myb_DNA-binding	44.8	2.8e-14	86	130	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T +E++ ++++ ++lG++ W++Ia++++ Rt++++k++w++ Kaladp0040s0439.1.p 86 RGNFTDQEQKMIIHLQALLGNR-WAAIASYLP-QRTENDIKNYWNTN 130 89******************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MERSPSRSDD HSHCNSSSGS KTTASASSGG LKKGPWTPEE DIILVSYVQQ HGASNWRAVP 60 ANAGLLRCSK SCRLRWTNYL RPGIKRGNFT DQEQKMIIHL QALLGNRWAA IASYLPQRTE 120 NDIKNYWNTN LRKKAIKNQL GHCGLGEDHE GGSSLLSYSV DQSAATKGQW ERRLQTDINL 180 AKQALSRALA VDDTDLELAS SDQTRHQLMA GTSNSFIDSV TPSPTISTTY ASSTANISKL 240 LDGWMKKKEP AVPSAATSSY AATQFNGVNQ FGNITCASSS REYYDQFDEY METKPYVDSQ 300 VPLLEKWLMF DDGGNNAAAS SAPGGTSQDQ LAAHELMSTD VTTFDQQNII DSMFF*

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MERSPSRSDD HSHCNSSSGS KTTASASSGG LKKGPWTPEE DIILVSYVQQ HGASNWRAVP  60
ANAGLLRCSK SCRLRWTNYL RPGIKRGNFT DQEQKMIIHL QALLGNRWAA IASYLPQRTE  120
NDIKNYWNTN LRKKAIKNQL GHCGLGEDHE GGSSLLSYSV DQSAATKGQW ERRLQTDINL  180
AKQALSRALA VDDTDLELAS SDQTRHQLMA GTSNSFIDSV TPSPTISTTY ASSTANISKL  240
LDGWMKKKEP AVPSAATSSY AATQFNGVNQ FGNITCASSS REYYDQFDEY METKPYVDSQ  300
VPLLEKWLMF DDGGNNAAAS SAPGGTSQDQ LAAHELMSTD VTTFDQQNII DSMFF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28910.1	4e-89	MYB family protein