PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0534.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WOX
Protein Properties Length: 319aa    MW: 35103.4 Da    PI: 8.1518
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0534.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.99.7e-2050111257
                          T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox   2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                          ++R+t+t++q+++L++l+++   r p+ae++++++++l    +++ ++V++WFqN++a+e++
  Kaladp0040s0534.1.p  50 STRWTPTTDQIRILKDLYYNngVRSPTAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 111
                          58*****************8678*************************************97 PP
2Wus_type_Homeobox113.79.5e-3749113265
    Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                          ++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
  Kaladp0040s0534.1.p  49 SSTRWTPTTDQIRILKDLYYnNGVRSPTAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKR 113
                          689***************9779*****************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MEAQQQQHNT MMGDDLGGGK LAATSFTRTQ TSSTNNNSLV NNNGGGSSSS TRWTPTTDQI  60
RILKDLYYNN GVRSPTAEQI QRISARLRQY GKIEGKNVFY WFQNHKARER QKRRFNTTST  120
TTNNNTAPAP LPPASTVWKP SSLDSSTPHI HTAAAAAASK YSDINNNQNL IYPAGHNQMS  180
GFGYAASVTM EKSFRDCSIS TGGSSFRWAK GGMADHHLSH HPCPHTSPYA IYNQRKSINS  240
DEYHELLAST SDHREHGDNR GAEIETLPLF PMHGEDINYG FCHLNSAETD GWFNRDVGGG  300
SRASLELSLN SYAGMDHI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-30WOX family protein