PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0540.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 226aa    MW: 25423.1 Da    PI: 8.9555
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0540.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.21.7e-1974127356
                          --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          +++++++eq+ +Le  F +++++  +++e+LA +lgL+ rqV vWFqNrRa++k
  Kaladp0040s0540.1.p  74 NKRKLSEEQVSVLEVNFGNEHKLECDRKERLAGELGLDPRQVAVWFQNRRARWK 127
                          56799************************************************9 PP
2HD-ZIP_I/II1149.2e-3774164292
          HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                          +kr+ls+eqv++LE +F +e+kLe +rK++la eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+a+d+l  +n++L+++v +L+e l
  Kaladp0040s0540.1.p  74 NKRKLSEEQVSVLEVNFGNEHKLECDRKERLAGELGLDPRQVAVWFQNRRARWKAKKLEEEYSRLKAAHDTLLLHNSQLQSQVMKLEELL 163
                          79************************************************************************************9877 PP

          HD-ZIP_I/II  92 k 92 
                          +
  Kaladp0040s0540.1.p 164 E 164
                          6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MISAVKNNRS EVGDDHRLLI SQMYDSAGVV YAQIMETTGK QEAAGVGGKK MRRKKRKQKR  60
KEAAACSSEA GLKNKRKLSE EQVSVLEVNF GNEHKLECDR KERLAGELGL DPRQVAVWFQ  120
NRRARWKAKK LEEEYSRLKA AHDTLLLHNS QLQSQVMKLE ELLEKQARMR LCSEGNSPTS  180
SGSMGAAPFL GLGGFGIIEE CLPNEFYTAH QNCAMEMEWP TLYDM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14957KKMRRKKRK
25260KKMRRKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66700.18e-43HD-ZIP family protein