PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0681.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 211aa    MW: 24130.7 Da    PI: 10.4194
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0681.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.81.7e-10106146451
                  AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                          + V++  k+ +W A I++      +k+++lg+ gt eeAa ++++a+ 
  Kaladp0040s0681.2.p 106 RVVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAAHLYDRAAY 146
                          77887..47*********4.....5********************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MVSVRKAWRK LMGLSPVQSS FVDPLADISS NEKKFDSPPL LSKPIIAHSI PPGVDQTMKD  60
DFRPSLNHLS ASSLTKEQPA PPISEFKRRK RHKRKQIQDQ ETCLMRVVYF KNMKWQAAIK  120
VDKKQIHLGT VGTQEEAAHL YDRAAYMCGR EPNFELSEVE KQELKQLNWD EFLEITRSTI  180
TSKKHQRRGI VSSRRRSVLS SQHSSSMDGE *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18896RRKRHKRKQ
28997RRKRHKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-43ERF family protein