PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0041s0013.4.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YA
Protein Properties Length: 268aa    MW: 29175.6 Da    PI: 9.9604
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0041s0013.4.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.51.9e-3295151158
            CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                          +ep+YVNaKQy++I++RRq Rak+e ekk+ +k+rkpylheSRh+hA+rR+Rg+gGrF
  Kaladp0041s0013.4.p  95 EEPVYVNAKQYNGIMRRRQIRAKAELEKKV-IKNRKPYLHESRHQHAMRRARGCGGRF 151
                          69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MNIAGNFNKV IPSGIALRPD GYSGQGNQTL TTSQSTMSEN PSESTPRELV DGSMVAASYP  60
YRDPSYGAIV APYGQQPLVY GVNQARMALP LEMEEEPVYV NAKQYNGIMR RRQIRAKAEL  120
EKKVIKNRKP YLHESRHQHA MRRARGCGGR FLNTKKLNSE TSNSTSAALD GTQHNGTLSN  180
QLILPRGLGN NLPASSSGYL YPLTEPQNSS FVPDTSMGHN IVSFGSSSSS NIGGHDRSSR  240
YQTLPGDAQA YSSMQMTGPP RRTYPIT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.14e-42NF-YA family protein