PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0042s0038.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 412aa    MW: 46969 Da    PI: 10.1322
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0042s0038.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.73.3e-161099198
                         EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                   B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92
                         ffkv t+++++++  + +p++f++ + g  +++    l  +sg++W v+l   + +++ ++t+GW+ Fvk+n ++ gDf+ Fkl+ +  f  
  Kaladp0042s0038.1.p 10 FFKVYTTEHSFNR--MKVPREFVAYMRGR-TCG-AAELAGPSGETWLVEL--VQEGKHLFFTDGWQTFVKENMVEYGDFLFFKLHCNLMF-- 93
                         8999999999975..8*******555555.565.89**************..999999*************************9875444.. PP

                         EEEEE- CS
                   B3 93 vvkvfr 98
                          v +f+
  Kaladp0042s0038.1.p 94 SVVIFD 99
                         666665 PP
2B359.84.7e-19178263897
                          -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                   B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                          s+ +  + l++p++f++e+++k e++ +++l+++++ sWev++   +++g++ l +GW  F+++n+L++gD++ F+l++  + e+ v+v 
  Kaladp0042s0038.1.p 178 SNLGLGNYLRFPRSFIRENSLKYESNEKMVLRTSNNSSWEVNI--INNGGAISLCRGWAAFARDNNLRVGDVCKFELVD--RLEMAVHVS 263
                          444555889**********99999999****************..99999**************************987..455567665 PP
3B350.63.5e-16315406196
                          EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                          f+  +++ +v +  ++ +p  f++e++    + ++++l++    sW+v+l    ++ +y + +GW +Fv++n++kegD++ F+l +  + 
  Kaladp0042s0038.1.p 315 FVACMKKYHVKRPFIMNIPTWFVRENSVRYGRLQKMVLRTNGDSSWSVNL--LHNQHKYCFCGGWADFVRDNNIKEGDSCKFELLN--RL 400
                          556677778888899***********666678889***************..777778*************************876..45 PP

                          ..EEEE CS
                   B3  91 elvvkv 96 
                          e++v++
  Kaladp0042s0038.1.p 401 EMKVHL 406
                          556665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MDEADNLPEF FKVYTTEHSF NRMKVPREFV AYMRGRTCGA AELAGPSGET WLVELVQEGK  60
HLFFTDGWQT FVKENMVEYG DFLFFKLHCN LMFSVVIFDE TMCEKGVALG AKCSRGRDGV  120
LEAEEVQNGA KPVKRNRVRR SLSKGIGSDL ITPDPKDRAA ERISTSVKAS FVQHIKISNL  180
GLGNYLRFPR SFIRENSLKY ESNEKMVLRT SNNSSWEVNI INNGGAISLC RGWAAFARDN  240
NLRVGDVCKF ELVDRLEMAV HVSQRHVEIR PEKVNAARSN LRPLTRAVGA SQPVLRRVGQ  300
KEAARSRPSS VKPSFVACMK KYHVKRPFIM NIPTWFVREN SVRYGRLQKM VLRTNGDSSW  360
SVNLLHNQHK YCFCGGWADF VRDNNIKEGD SCKFELLNRL EMKVHLMPRS K*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-20B3 family protein