PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0042s0046.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 386aa    MW: 44180.6 Da    PI: 9.4539
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0042s0046.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.79.8e-148583587
                         EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                   B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87
                         t  l  +sg++W v++  +  ++  ++t+GW+ Fv++n +++gDf+ Fkl g+
  Kaladp0042s0046.2.p  8 TAELAGRSGQTWLVEV--DYDGKDLYFTDGWQAFVEDNMVQDGDFLFFKLLGN 58
                         678999**********..888888*************************9886 PP
2B3573.6e-18134225196
                          EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                          f+k  t s+    + l++p  fa+eh+++ +++ +++l+++++ sW+v++   +++g++ l +GW  F+++n+L+ gD++ F+l+gr   
  Kaladp0042s0046.2.p 134 FEKHITISNIEHGHYLRIPSYFAQEHSLNYKSNEKMVLRTSRNSSWKVNI--INRGGEISLCRGWAAFARENNLRLGDVCNFELVGR--L 219
                          677777777777899***********88888999****************..999999*************************9985..5 PP

                          ..EEEE CS
                   B3  91 elvvkv 96 
                          e++v+v
  Kaladp0042s0046.2.p 220 EMLVHV 225
                          556665 PP
3B353.44.8e-17285380296
                          EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                   B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrse 89 
                          +  +++++v ks+ l +p  f++e+++  e++ +++l++e+   W + +i++k+ ++  + l++GW +Fv++n++kegD++ F+l++r e
  Kaladp0042s0046.2.p 285 VALMKKHHVEKSA-LNIPAWFFRENSLHYERNEKMVLRSEKDSLWLLSIIHSKYNNKtlCRLSGGWIDFVRDNNIKEGDTCKFELVNRLE 373
                          4455556666665.***********99999999****************99777777679999*********************997644 PP

                          E..EEEE CS
                   B3  90 felvvkv 96 
                           +++++ 
  Kaladp0042s0046.2.p 374 MKFHIMP 380
                          4344444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MDERKFGTAE LAGRSGQTWL VEVDYDGKDL YFTDGWQAFV EDNMVQDGDF LFFKLLGNLM  60
FSFIIYDETM CEKEAAFNGK CSRGRDGVVE AVEEPMGLKP VKRRNMGCSQ PEGSLFTSMD  120
KTAVKTSTSV KPSFEKHITI SNIEHGHYLR IPSYFAQEHS LNYKSNEKMV LRTSRNSSWK  180
VNIINRGGEI SLCRGWAAFA RENNLRLGDV CNFELVGRLE MLVHVTHQDK VIEQKQLNVA  240
APKIRPSERA VGVSQPKLRQ GSPITTERQK AAGRSRPSLV KPSFVALMKK HHVEKSALNI  300
PAWFFRENSL HYERNEKMVL RSEKDSLWLL SIIHSKYNNK TLCRLSGGWI DFVRDNNIKE  360
GDTCKFELVN RLEMKFHIMP RSKQD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198104LKPVKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.17e-17B3 family protein