PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0042s0058.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 236aa    MW: 26646.9 Da    PI: 10.5602
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0042s0058.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.43.5e-15136225198
                          EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                          f+  ++ps+v++  +l lp  f+++h  + ++++ +tl de+g ++  +     ++ +  l++GWk+F+ a +L +gD +vF+l++ + f
  Kaladp0042s0058.1.p 136 FVRPMLPSHVSSCFWLGLPSYFCKQHL-P-KQDTVMTLVDEKGDEYPTRW--LPRKTG--LSGGWKGFAVARELVDGDALVFQLISPTAF 219
                          778899*****************9995.3.36789***************..555544..************************987777 PP

                          ..EEEEE- CS
                   B3  91 elvvkvfr 98 
                            +v ++r
  Kaladp0042s0058.1.p 220 --KVYIVR 225
                          ..777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MTRPHTTQSS KMVMPSYEQC RQKRLEENKK RMEALNLPQL AKTLREISTP PRPTPAKRRP  60
YAKQLVAVRR SPRVANMPAG PVYVEVDVAV GRLSIPRRLS KPRAMSGAYA TNEAREWSIT  120
RAEELQSALD QAYPSFVRPM LPSHVSSCFW LGLPSYFCKQ HLPKQDTVMT LVDEKGDEYP  180
TRWLPRKTGL SGGWKGFAVA RELVDGDALV FQLISPTAFK VYIVRVEGFK EGTKQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-61B3 family protein