PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0042s0080.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 311aa    MW: 34566.9 Da    PI: 6.3706
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0042s0080.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM87.62.2e-27121541128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...lelee...........vikevdiykvePwdLpk......kvkaeekewyfFskrdkkyat 70 
                          lppG+rFhP+d++l+ +yL kk  +                     vikevd+ k++P dLp+       +k+++++wy +  r+ k   
  Kaladp0042s0080.1.p  12 LPPGCRFHPSDDQLIRYYLLKKNGNGAaaaA---AsddridgygfdVIKEVDVGKYNPFDLPEwccycyGYKGRKRHWYGYRMRAVK--- 95 
                          79********************999885541...2445677777779***************6688865555566688888777665... PP

                  NAM  71 gkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgr.apkgektdWvmheyrl 128
                           +r  r+t+sg+Wk  g+ ++v+   +g + g + +++fy g+ a+ +++t+W mhey+l
  Kaladp0042s0080.1.p  96 -ERLVRMTASGFWKRRGRVRDVVGYgGGVVLGKRVSFAFYLGNlAEGAVRTNWYMHEYAL 154
                          .599******************9985677799999*****986155557*********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MDRHAVADLP PLPPGCRFHP SDDQLIRYYL LKKNGNGAAA AAASDDRIDG YGFDVIKEVD  60
VGKYNPFDLP EWCCYCYGYK GRKRHWYGYR MRAVKERLVR MTASGFWKRR GRVRDVVGYG  120
GGVVLGKRVS FAFYLGNLAE GAVRTNWYMH EYALVDPKAF VLCRVFVKFR RGHASNASEH  180
ALCSFAHKNV GVQHDETVTS DVEGAKACDI NSVDRGIQTS SMSSGRMIDK DDMKDPGPDS  240
GFHLQLQSGS HLLAYPVGSS MTEHEKSSDG LILLGESSDV LTSEHLDCIL EEDFIELNDL  300
LSPLPENDDT *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.15e-18NAC family protein