PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0042s0292.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 259aa    MW: 28658.2 Da    PI: 4.8619
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0042s0292.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.1e-1360102754
                          HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                            Er+RR+++N++++ Lr ++P+      +K++Ka+i + A+ YI++L
  Kaladp0042s0292.1.p  60 VSERNRRKKLNDRLFALRAVVPNI-----TKMDKASIIKDAISYIQEL 102
                          57*********************7.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MEDNIGDEYK NYWETNMFLQ TEELDSWGGG LDETAFSGYY DSSSPDGGGA SSSMASKNIV  60
SERNRRKKLN DRLFALRAVV PNITKMDKAS IIKDAISYIQ ELHEQEGRLE AEIAGLENNI  120
RMKSMGSMSP SSYEDLKKPL SRKKKKRIDT ASHDTTNNLS STSASPIEIL ELRVAHMGER  180
SVVVSITCTK RGDTMVKLCE AFESLQLKIL TSNMTTFSSN TLVNTLFIQG EEDETQSIKS  240
EIETAIAALN DARSPMSL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142147RKKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.16e-71bHLH family protein