PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0042s0326.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 730aa    MW: 79945.6 Da    PI: 6.2149
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0042s0326.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.94.8e-2058113156
                          TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          +++ +++t+ q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  Kaladp0042s0326.1.p  58 KKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 113
                          688999***********************************************998 PP
2START223.95.1e-702464661206
                          HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S.... CS
                START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla.... 77 
                          ela +a++el+++a+a++p+W  s+    e++ ++e+l++f+++ +      ++ea+r+s+vv+m++  lve+l+d++ qW++++     
  Kaladp0042s0326.1.p 246 ELAVAAMEELIRMAQAGDPVWIPSAdnstEILCEEEYLRSFPRGIGpkplgLKSEASRESTVVIMNHISLVEILMDVN-QWSTMFSgivs 334
                          57899********************99999999**********999********************************.*********** PP

                          EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTC CS
                START  78 kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksng 160
                          +a+tlev+s+g      galq+m+ae+q++splvp R+ +fvRy++q+++g+w++vdvS+ds ++ p    v+R++++pSg+li++++ng
  Kaladp0042s0326.1.p 335 RAMTLEVLSTGvagnynGALQVMTAEFQVPSPLVPtRENYFVRYCKQHPDGTWAVVDVSLDSLRPSP----VARSRRRPSGCLIQEMPNG 420
                          *****************************************************************98....7****************** PP

                          EEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                START 161 hskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                          +skvtwvehv++++r +h+++r+lv+s +a+gak+wvatl+rqce+
  Kaladp0042s0326.1.p 421 YSKVTWVEHVEVDDRGVHNIYRPLVNSNHAFGAKRWVATLDRQCER 466
                          ********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 730 aa     Download sequence    
MYQPNLFVDT SHHHLLDMGH SKTPENELGS LRDEDFESKS GTEAQSGDDQ DPNTRPKKKR  60
YHRHTQRQIQ EMEAFFKECP HPDDKQRKEL SRELGLEPLQ VKFWFQNKRT QMKGQHERHE  120
NSQLRAENEK LRADNMRCKE VLGNATCPNC GGPAAIGEMS FDEQHLRIEN ARLREEIDRI  180
SGIAAKYIGK PLVTYPHLPS RSPLEIGVGS FGAQAGGMAG GDMFGVSDLI RSVSGPTEAD  240
KPVIIELAVA AMEELIRMAQ AGDPVWIPSA DNSTEILCEE EYLRSFPRGI GPKPLGLKSE  300
ASRESTVVIM NHISLVEILM DVNQWSTMFS GIVSRAMTLE VLSTGVAGNY NGALQVMTAE  360
FQVPSPLVPT RENYFVRYCK QHPDGTWAVV DVSLDSLRPS PVARSRRRPS GCLIQEMPNG  420
YSKVTWVEHV EVDDRGVHNI YRPLVNSNHA FGAKRWVATL DRQCERLASL MASNINTGDV  480
GVITRPDGRK SMLKLAERMV MSFCGGVGAS TAHTWTTLSG TNADDVRVMT RKSMDDPGRP  540
PGIVLSAATS FWIPVPPKRV FDFLRDENSR NEWDILSNGG LVQEMAHIAN GRDPGNCVSL  600
LRVNSANSSQ SNMLILQEST TDATGSYVIY APVDVVAMNV VLNGGDPDYV ALLPSGFAIL  660
PDNGILSNSV GQHGVLDVGT GGSLLTVAFQ ILVDSVPTAK LSLGSVATVN SLIKCTVERI  720
KAALSCESA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.20.0HD-ZIP family protein