PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0042s0334.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 244aa    MW: 27615.3 Da    PI: 6.3831
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0042s0334.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.2e-134591455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         +h  +ErrRR++++ +f  Lr+l+P+       K++K++iL  +++Y+k+L+
  Kaladp0042s0334.1.p 45 NHVLAERRRREKLKRRFLVLRSLVPTT-----AKVDKISILDDTIKYLKELE 91
                         6899**********************6.....5****************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MHSEGLLGPP EKDHKNVIQK GCDDTYLPEA EDLIDMDLPE ETGLNHVLAE RRRREKLKRR  60
FLVLRSLVPT TAKVDKISIL DDTIKYLKEL ERKIDELESA KETAANTETT MVTKSAQDGT  120
KETSSYNYEV EETHIASKKR RKAFDTGGNN INRRASSKRE CNDDLVVEVE DKDVRVEVRC  180
GWRKGLVPEV MEALSDLDLE STSVCTRSSD GILYLKITSK VQGLKVASAK LIKQEMERIV  240
HNR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15055ERRRRE
25156RRRREK
3138142KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63650.18e-27bHLH family protein