PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0042s0372.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 213aa    MW: 24512.3 Da    PI: 5.4723
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0042s0372.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.23.2e-191569256
                         T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                          kR++f+++q++ Le lF ++++p  +++++LA+ l L  rqV +WFqNrRa+ +
  Kaladp0042s0372.1.p 15 EKRRRFSEKQIKSLEILFGSESKPEPRTKQQLASDLALHPRQVAIWFQNRRARLR 69
                         58***************************************************87 PP
2HD-ZIP_I/II107.41.1e-3415107193
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          ek+rr+s++q+k+LE  F +e+k ep+ K++la++L l+prqva+WFqnrRAR ++kq+E++y  Lk+++d+l+++ e L+ke+++L ++
  Kaladp0042s0372.1.p  15 EKRRRFSEKQIKSLEILFGSESKPEPRTKQQLASDLALHPRQVAIWFQNRRARLRSKQIEREYGILKASHDTLASKFECLKKEKQTLDAQ 104
                          699*************************************************************************************99 PP

          HD-ZIP_I/II  91 lke 93 
                          +++
  Kaladp0042s0372.1.p 105 VQA 107
                          986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MMSLEMGGSR GGKNEKRRRF SEKQIKSLEI LFGSESKPEP RTKQQLASDL ALHPRQVAIW  60
FQNRRARLRS KQIEREYGIL KASHDTLASK FECLKKEKQT LDAQVQALRD QLRTDEGNIA  120
GSALPSKQSW RNEEPEIEDY FHESKGKPTY IMESYNYETD NKSNPDCLKE EDYILNLAEP  180
VDSSLTSSEN SWDSSCFLDQ TCSSSLLWEF WS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11520EKRRRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.19e-47HD-ZIP family protein