PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0043s0136.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 362aa MW: 40135.3 Da PI: 8.2826

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0043s0136.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169	1.6e-52	5	132	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 + pGfrFhPtdeelv +yLk+kv++++l++ + ik +diyk++PwdLp k++++ekewyfF++rd+ky++++r+nr+t g+Wkatg+d+ Kaladp0043s0136.1.p 5 MLPGFRFHPTDEELVGFYLKRKVQHRPLPV-DLIKPLDIYKHDPWDLP-KMASREKEWYFFCPRDRKYRNSTRPNRVTGGGFWKATGTDR 92 579*************************.99***********.778899******************************* PP NAM 91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++s+ g+ +glkk+Lvfykgra kg+ktdW+mhe+rl Kaladp0043s0136.1.p 93 PIYSSegPGKCIGLKKSLVFYKGRAAKGTKTDWMMHEFRL 132 9766778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MEDTMLPGFR FHPTDEELVG FYLKRKVQHR PLPVDLIKPL DIYKHDPWDL PKMASREKEW 60 YFFCPRDRKY RNSTRPNRVT GGGFWKATGT DRPIYSSEGP GKCIGLKKSL VFYKGRAAKG 120 TKTDWMMHEF RLPSADDQPM LPSKRFMDRS IPANDAWAIC RIFKKTSATA VRAATQGWAC 180 CSAFQLAAPE DDARDSGFIS GNISFAPPKS HPVQTSSFSP NVMIQIDNDP HFNLTSYKPG 240 NALTQKPPGA TNWGASHHHP PPSSLIHAAA TARLCDSQGP QSITRISPAS SQPVISDYEA 300 YFDDQLGIDL SAEDGNSFDL PLNLSDAWRS LGPDSSLCPT ADISATVRRI RMDQSESLGN 360 V*

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MEDTMLPGFR FHPTDEELVG FYLKRKVQHR PLPVDLIKPL DIYKHDPWDL PKMASREKEW  60
YFFCPRDRKY RNSTRPNRVT GGGFWKATGT DRPIYSSEGP GKCIGLKKSL VFYKGRAAKG  120
TKTDWMMHEF RLPSADDQPM LPSKRFMDRS IPANDAWAIC RIFKKTSATA VRAATQGWAC  180
CSAFQLAAPE DDARDSGFIS GNISFAPPKS HPVQTSSFSP NVMIQIDNDP HFNLTSYKPG  240
NALTQKPPGA TNWGASHHHP PPSSLIHAAA TARLCDSQGP QSITRISPAS SQPVISDYEA  300
YFDDQLGIDL SAEDGNSFDL PLNLSDAWRS LGPDSSLCPT ADISATVRRI RMDQSESLGN  360
V*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	5e-93	NAC family protein