PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0043s0197.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YB
Protein Properties Length: 188aa    MW: 20553.9 Da    PI: 5.3474
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0043s0197.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB172.54.6e-5423118297
                NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 
                          ++ dr+lP+anvsr+mkk lP nakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedyv plk yl+kyr
  Kaladp0043s0197.1.p  23 KDPDRLLPVANVSRLMKKSLPLNAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVGPLKSYLSKYR 112
                          678*************************************************************************************** PP

                NF-YB  92 elegek 97 
                          eleg+k
  Kaladp0043s0197.1.p 113 ELEGDK 118
                          ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MTGKRANPSS PPPSPTTDQT SSKDPDRLLP VANVSRLMKK SLPLNAKISK EAKETVQECV  60
SEFISFITGE ASDKCQREKR KTINGDDLLW AMTTLGFEDY VGPLKSYLSK YRELEGDKSA  120
MAARQDQEAD ANGQMGVGDF DKVVNFGGNG RREDHDGHLG VEDFVDKYQY LLSANGGGGE  180
LHHGVQW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.14e-60NF-YB family protein