PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0043s0276.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 835aa    MW: 92287.1 Da    PI: 6.8544
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0043s0276.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.45.8e-191775357
                         --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                         k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Kaladp0043s0276.1.p 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLVRECpilfNIEPKQIKVWFQNRRCREKQ 75
                         5679*****************************************************97 PP
2START166.42e-521613692205
                          HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..E CS
                START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..g 89 
                          +aee+++e+++ka+ ++  Wv+++  ++g++++ +++ s++++g a+ra+g+v  +++++ve l d++  W ++++++++++v+ ++  g
  Kaladp0043s0276.1.p 161 IAEETLTEFLSKATGTAIEWVQMPGVKPGPDSIGIIAISHGCTGVAARACGLVSLEPTRVVEVLKDRP-SWFRDCRAVDVVNVLPTAngG 249
                          789*******************************************************7777777777.****************9999* PP

                          EEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SS CS
                START  90 alqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgr 175
                          +++l +++l+a+++l+p Rdf+  Ry+  +++g++v++++S+ ++q+ p+    +s+vRae lpSg+li+p+++g+s +++v+hvdl+  
  Kaladp0043s0276.1.p 250 TIELLYMQLYAPTTLAPaRDFWLMRYTSVMEDGSLVVCERSLKHTQNGPNvptVQSFVRAEILPSGYLIRPCDGGGSIIHIVDHVDLEPL 339
                          *************************************************999999*********************************** PP

                          XXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
                START 176 lphwllrslvksglaegaktwvatlqrqce 205
                          +++++lr+l++s ++ ++k+++a+l+++++
  Kaladp0043s0276.1.p 340 SVPEVLRPLYESPTILAQKMTMAALRQLRQ 369
                          *************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 835 aa     Download sequence    
MMSMSCKDSK HVMDNGKYVR YTPEQVEALE RLYHECPKPS SIRRQQLVRE CPILFNIEPK  60
QIKVWFQNRR CREKQRKEAS RLQAVNRKLN AMNKLLIEEN DRLQKQVSQL VCENGYFRQR  120
NQNPKSATKD TSCESVVTNG QHQLVLQNPP RDASPAGLLS IAEETLTEFL SKATGTAIEW  180
VQMPGVKPGP DSIGIIAISH GCTGVAARAC GLVSLEPTRV VEVLKDRPSW FRDCRAVDVV  240
NVLPTANGGT IELLYMQLYA PTTLAPARDF WLMRYTSVME DGSLVVCERS LKHTQNGPNV  300
PTVQSFVRAE ILPSGYLIRP CDGGGSIIHI VDHVDLEPLS VPEVLRPLYE SPTILAQKMT  360
MAALRQLRQM AYEVSPPNAT NWSRKPAALH ALSNRLSRGF NEALNGFSDE GWIAMGNDGM  420
DDVAILVNSS PNKLMGLNLS FGNGFSPVCN TVLCAKASML LQNVPPAILL RFLREHRSEW  480
ADNNIDAYSA AAIKAGPCNL PGIRVGGFGG QVILPLAHTI EHEELLEVIK LECVGHCPED  540
AMMPRDMFLL QMCSGVDEHA VGTCSELIFA PIDASFTDDT PLLPSGFRII PLESVRDSSS  600
PNRTLDLASA LETGTRTSND CSLKSGSTRS VMSIAFQFAC ESHMQESVAS MARHYVRSII  660
SSVQRVALAL SPNLSSNGLL RSPSQTPEAK TLSRWICTSY RYSLGVELLK ASSKSNESML  720
ETLWHHPDAI MCCSLKALPV FTFANQAGLD MLETTTIALQ EMTLDKIFDE QGRRTLCSEL  780
PQIMQQGFSC LPGGICVSIM GRPISYERAV AWKVLNDEDK AHCICFMFVN WSFV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein