PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0043s0282.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 748aa    MW: 82886.7 Da    PI: 7.0318
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0043s0282.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox68.21.1e-2194149156
                          TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL+ rqVk+WFqNrR++ k
  Kaladp0043s0282.1.p  94 RKKYHRHTAEQIREMEALFKESPHPDEKQRQDLSKQLGLSSRQVKFWFQNRRTQIK 149
                          7999************************************************9877 PP
2START198.72.5e-622654892205
                          HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S.. CS
                START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv........dsgealrasgvvdmvlallveellddkeqWdetla.. 77 
                          +a+ a +el+++a++++p+Wv+s+    e++n+d++++ f ++            +ea+r++++v+++l++l ++++d   +W+e ++  
  Kaladp0043s0282.1.p 265 IANHAVEELIQMATVGAPLWVQSVeagrEILNYDVYMKLFCKETDtfsslrptEAIEASRDTRLVFANLPQLAQSFMDAD-KWKELFPtm 353
                          678999*********************************97755589*********************************.****99999 PP

                          ..EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEEC CS
                START  78 ..kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepks 158
                            ka+t++ i++g      ga+qlm+aelq+l+p+vp R+++f+R+++ql+a +w+ivdvSvd   ++  +s + ++ ++pSg++ie++s
  Kaladp0043s0282.1.p 354 isKATTIDIIRNGegpsrnGAVQLMFAELQMLTPMVPsREVYFIRSCKQLSASQWAIVDVSVDKYMDNA-ESLFKKCSKRPSGCIIEDTS 442
                          99******************************************************************9.8******************* PP

                          TCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
                START 159 nghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                          ngh+kv+wveh ++++  +h+++r +v+sg+a+ga++w+atlq qce
  Kaladp0043s0282.1.p 443 NGHCKVIWVEHLECQKIPVHNIYRTIVNSGQAFGASRWMATLQLQCE 489
                          **********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 748 aa     Download sequence    
MSHLPSYPTK NFIDSPALTL SLAGIFHRAD PAPVVTATAK VVERHNGGVR REEAVEISSD  60
NSGPSCRSRS DDDIGFEGEG NDEDDVNEQR KKKRKKYHRH TAEQIREMEA LFKESPHPDE  120
KQRQDLSKQL GLSSRQVKFW FQNRRTQIKA FQERHENSLL KSEMEKLREE NKLMRETIQK  180
TCCPSCGIST SGKESSSSTE EKYLRIENKR LKSEVENLQS ALSKYSGPGT GLPDSGHAEQ  240
EPKSSLGLST SAEVLGLQKS TIMNIANHAV EELIQMATVG APLWVQSVEA GREILNYDVY  300
MKLFCKETDT FSSLRPTEAI EASRDTRLVF ANLPQLAQSF MDADKWKELF PTMISKATTI  360
DIIRNGEGPS RNGAVQLMFA ELQMLTPMVP SREVYFIRSC KQLSASQWAI VDVSVDKYMD  420
NAESLFKKCS KRPSGCIIED TSNGHCKVIW VEHLECQKIP VHNIYRTIVN SGQAFGASRW  480
MATLQLQCEH LVFLKATNVP TKEANGIATV VGRKSTLTLA RRMSSSFCRA LGASSHHTWT  540
KVASTTGDDI RVSSRKNLHN PGEPHGLIVC AVSSVWIPVP PRELFDFIRD ERHRHEWDML  600
SNGVPVQSIT NLAKGQDRGN SVTIQATESK DNPIWVLQDT CTNTFESTIV YGLVDPTHMR  660
SAVMNGCNSS NTAILPSGFS ILSDGLESRP SVITSQPEDS NSGGSLLTMA IQALVNTSPT  720
AEAVDSVSTL VSCALSNIRK CLQCEDI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18996QRKKKRKK
29096RKKKRKK
39296KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein