PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0043s0282.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 733aa    MW: 81172.8 Da    PI: 7.0076
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0043s0282.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox68.21e-2179134156
                          TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL+ rqVk+WFqNrR++ k
  Kaladp0043s0282.2.p  79 RKKYHRHTAEQIREMEALFKESPHPDEKQRQDLSKQLGLSSRQVKFWFQNRRTQIK 134
                          7999************************************************9877 PP
2START198.82.4e-622504742205
                          HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S.. CS
                START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv........dsgealrasgvvdmvlallveellddkeqWdetla.. 77 
                          +a+ a +el+++a++++p+Wv+s+    e++n+d++++ f ++            +ea+r++++v+++l++l ++++d   +W+e ++  
  Kaladp0043s0282.2.p 250 IANHAVEELIQMATVGAPLWVQSVeagrEILNYDVYMKLFCKETDtfsslrptEAIEASRDTRLVFANLPQLAQSFMDAD-KWKELFPtm 338
                          678999*********************************97755589*********************************.****99999 PP

                          ..EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEEC CS
                START  78 ..kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepks 158
                            ka+t++ i++g      ga+qlm+aelq+l+p+vp R+++f+R+++ql+a +w+ivdvSvd   ++  +s + ++ ++pSg++ie++s
  Kaladp0043s0282.2.p 339 isKATTIDIIRNGegpsrnGAVQLMFAELQMLTPMVPsREVYFIRSCKQLSASQWAIVDVSVDKYMDNA-ESLFKKCSKRPSGCIIEDTS 427
                          99******************************************************************9.8******************* PP

                          TCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
                START 159 nghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                          ngh+kv+wveh ++++  +h+++r +v+sg+a+ga++w+atlq qce
  Kaladp0043s0282.2.p 428 NGHCKVIWVEHLECQKIPVHNIYRTIVNSGQAFGASRWMATLQLQCE 474
                          **********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 733 aa     Download sequence    
MSLIAGQAGI FHRADPAPVV TATAKVVERH NGGVRREEAV EISSDNSGPS CRSRSDDDIG  60
FEGEGNDEDD VNEQRKKKRK KYHRHTAEQI REMEALFKES PHPDEKQRQD LSKQLGLSSR  120
QVKFWFQNRR TQIKAFQERH ENSLLKSEME KLREENKLMR ETIQKTCCPS CGISTSGKES  180
SSSTEEKYLR IENKRLKSEV ENLQSALSKY SGPGTGLPDS GHAEQEPKSS LGLSTSAEVL  240
GLQKSTIMNI ANHAVEELIQ MATVGAPLWV QSVEAGREIL NYDVYMKLFC KETDTFSSLR  300
PTEAIEASRD TRLVFANLPQ LAQSFMDADK WKELFPTMIS KATTIDIIRN GEGPSRNGAV  360
QLMFAELQML TPMVPSREVY FIRSCKQLSA SQWAIVDVSV DKYMDNAESL FKKCSKRPSG  420
CIIEDTSNGH CKVIWVEHLE CQKIPVHNIY RTIVNSGQAF GASRWMATLQ LQCEHLVFLK  480
ATNVPTKEAN GIATVVGRKS TLTLARRMSS SFCRALGASS HHTWTKVAST TGDDIRVSSR  540
KNLHNPGEPH GLIVCAVSSV WIPVPPRELF DFIRDERHRH EWDMLSNGVP VQSITNLAKG  600
QDRGNSVTIQ ATESKDNPIW VLQDTCTNTF ESTIVYGLVD PTHMRSAVMN GCNSSNTAIL  660
PSGFSILSDG LESRPSVITS QPEDSNSGGS LLTMAIQALV NTSPTAEAVD SVSTLVSCAL  720
SNIRKCLQCE DI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17481QRKKKRKK
27581RKKKRKK
37781KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein