PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0044s0003.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 686aa MW: 78980.6 Da PI: 7.1059

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0044s0003.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.2	4.1e-21	93	188	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 +fY+eYA+ +GF+vr+s+skk kr ++++ + C+keg+++++ + ++ ++r+r++ r gCka++ +k+ +++ ++v+++++eH Kaladp0044s0003.1.p 93 DFYKEYAHFCGFQVRVSTSKKAKRCDSVYLQYVLCNKEGFHSSKFGDrlednASVAQRRRSTARSGCKARVLLKLVENSLYVVSDFVEEH 182 6***************************************99888888877788889999************************ PP FAR1 86 nHelap 91 nH+++p Kaladp0044s0003.1.p 183 NHPMTP 188 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MAASGKERFD LNSPPLSDSS PSDSIICILQ PETADCNVDS EGQYNDCGNA DTNPDNDPQH 60 QSANRAVVVV PECDQLMKPF HGKKFNNLQE GIDFYKEYAH FCGFQVRVST SKKAKRCDSV 120 YLQYVLCNKE GFHSSKFGDR LEDNASVAQR RRSTARSGCK ARVLLKLVEN SLYVVSDFVE 180 EHNHPMTPLV HQQFLKSNRS VNCAQQNFIM DCGNLRIGAQ KSHKIMKEIC GGYSNIGAQA 240 VDFKNFKRDF KNFVGDSDGQ IVIDRLKIKQ SCCDGFRFEY HVDSNGDLRR LLWADALSQI 300 HFQAFGDCVA FDATYRTNKY NLVFVPFTGV DNHKSCISFA GALLSNEDVE SYEWLLESFR 360 KVLGSSPRIW VTDQDPAMRI AIKRVFPDSI HRLCMWHITK KFTDKVNLYH CNKCFTMSID 420 VRQTIRLLNI LLHMQLGTKL CRDKDFLHKL NGIVWNGLIE PDEFDTRWEQ IIDEYNLEEN 480 KWLADMYEMR SSWIPAFFRD IHMGGLLRTT SRSESENSFF NGFLHSGMNL TEFFMAFESA 540 MDAQRHRKEQ LDHESESTYP PLKTSLPIEK HAAEIYTRRI FFYFQTEFYE ACVGCHVSTL 600 SEKDGVKFYD IKDKSSTQQV VKVVHYTTSD YVECSCKNYQ RIGIPCRHIL LALNAEDVDK 660 IPEKFIQKRW TKYAVHIQVT TLPQC*

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MAASGKERFD LNSPPLSDSS PSDSIICILQ PETADCNVDS EGQYNDCGNA DTNPDNDPQH  60
QSANRAVVVV PECDQLMKPF HGKKFNNLQE GIDFYKEYAH FCGFQVRVST SKKAKRCDSV  120
YLQYVLCNKE GFHSSKFGDR LEDNASVAQR RRSTARSGCK ARVLLKLVEN SLYVVSDFVE  180
EHNHPMTPLV HQQFLKSNRS VNCAQQNFIM DCGNLRIGAQ KSHKIMKEIC GGYSNIGAQA  240
VDFKNFKRDF KNFVGDSDGQ IVIDRLKIKQ SCCDGFRFEY HVDSNGDLRR LLWADALSQI  300
HFQAFGDCVA FDATYRTNKY NLVFVPFTGV DNHKSCISFA GALLSNEDVE SYEWLLESFR  360
KVLGSSPRIW VTDQDPAMRI AIKRVFPDSI HRLCMWHITK KFTDKVNLYH CNKCFTMSID  420
VRQTIRLLNI LLHMQLGTKL CRDKDFLHKL NGIVWNGLIE PDEFDTRWEQ IIDEYNLEEN  480
KWLADMYEMR SSWIPAFFRD IHMGGLLRTT SRSESENSFF NGFLHSGMNL TEFFMAFESA  540
MDAQRHRKEQ LDHESESTYP PLKTSLPIEK HAAEIYTRRI FFYFQTEFYE ACVGCHVSTL  600
SEKDGVKFYD IKDKSSTQQV VKVVHYTTSD YVECSCKNYQ RIGIPCRHIL LALNAEDVDK  660
IPEKFIQKRW TKYAVHIQVT TLPQC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-83	FAR1 family protein