PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0044s0082.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 251aa    MW: 28130 Da    PI: 4.9507
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0044s0082.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.96.4e-3154111359
                          -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers++d ++++itY+++Hnh+
  Kaladp0044s0082.1.p  54 DSWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSRTDASMLIITYTSTHNHP 111
                          99***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MEGSLISDQQ TQTRHHPNPE TQAAKRDKSV HKTVVTVKVV AGCGKQKNEG PPGDSWSWRK  60
YGQKPIKGSP YPRGYYRCST SKGCSAKKQV ERSRTDASML IITYTSTHNH PGPNLPGSTN  120
LTSQNQETQE LSTGEIVAEP KLEQPEVEDE LGENNIEREE DHFHYIEPPQ DVTNHNDGNP  180
FSVVLDSTHE SLGVLFDEEP ISYPPIRTSP KPESDEYDFF DELEELPMSL PFTSFMKSSF  240
CHDRILVQPS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-35WRKY family protein