PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0039.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 233aa    MW: 26349.6 Da    PI: 6.1711
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0039.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.51.3e-26959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         k+i+n s rqvtfskRr g++KKAeEL vLCda+v +i+fsstgkl eyss
  Kaladp0045s0039.1.p  9 KKIDNVSARQVTFSKRRRGLFKKAEELAVLCDADVGLIVFSSTGKLSEYSS 59
                         68***********************************************96 PP
2K-box51.73.8e-189317518100
                K-box  18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                          +++++kL +e+ +  +++R+l GedL+ L+++eL++Le+ Le +l+++ ++K e ++++i++lq k  +l een++Lr++++e
  Kaladp0045s0039.1.p  93 NRNYTKLSQEVAEKSHQLRRLRGEDLQGLDIEELRELEKTLEFGLNRVIETKGEKIMNEINHLQAKGAQLMEENERLRRQVAE 175
                          57899***************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MVREKIQIKK IDNVSARQVT FSKRRRGLFK KAEELAVLCD ADVGLIVFSS TGKLSEYSSS  60
SMKEILERYK MQSKYLEKLQ QPTPSLELQL VENRNYTKLS QEVAEKSHQL RRLRGEDLQG  120
LDIEELRELE KTLEFGLNRV IETKGEKIMN EINHLQAKGA QLMEENERLR RQVAEMSNNG  180
HVKLSGVSFS ETTAYEDGHS ESITNGSNNS NNGPPPESDD SSDTSLRLGL PY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.13e-89MIKC_MADS family protein