PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0114.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YB
Protein Properties Length: 156aa    MW: 17160.5 Da    PI: 4.3597
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0114.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB77.71.6e-241197389
                NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89
                         ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +++se++d c +e++kti+++ +l al  lGf +y+e++ + +++
  Kaladp0045s0114.2.p 11 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLIIECCVEFINLISSESNDVCSKEEKKTIAPEHVLKALEVLGFGEYIEEVYAAFEQ 97
                         6899***************************************************************************98766555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MEPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLIIECCVEF INLISSESND  60
VCSKEEKKTI APEHVLKALE VLGFGEYIEE VYAAFEQHKL ETVDTVKGGK WSNGAEMTEE  120
EALAEQQRMF AEARARMNGG AAVPKQSESD PSLQN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.46e-94NF-YB family protein