PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0123.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 261aa    MW: 28294.8 Da    PI: 8.633
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0123.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.51.9e-18187220134
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                          C +Cg+ kTp+WR gpdg+ktLCnaCG++y++ +
  Kaladp0045s0123.1.p 187 CKHCGSEKTPQWRAGPDGPKTLCNACGVRYKSGR 220
                          *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MGFFDTAPSA CFIDDLLNFN IDDNDRDKAN GSKNPKSLSP PNTFFPLPES EEEEELEWLS  60
NKDVFPSVDT FVPSVETFVD VIPVEPSTGV LKHVSPVSVL ENSISSFGSN NSNDSNAVIT  120
TCCIGRGLAP PIRRPRSRGS QKRRRGGFVD ISSQQWFICC SSIHTNKTGN NAAKASGIAS  180
GITGRKCKHC GSEKTPQWRA GPDGPKTLCN ACGVRYKSGR LCPEYRPASS PTFSSAVHSN  240
SHRKILEMKK MKQHNGKPCG *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.11e-42GATA family protein