PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0045s0285.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 512aa MW: 55763.1 Da PI: 8.3683

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0045s0285.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	76	98	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Kaladp0045s0285.1.p 76 FVCEICNKGFQRDQNLQLHRRGH 98 89*******************88 PP
2	zf-C2H2	15.6	4.6e-05	152	174	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ Kaladp0045s0285.1.p 152 WKCDKCSKKYAVQSDWKAHQKTC 174 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MSNLTGEDGS FTSAANSCED DEAHQQRQTQ AAAGSSNDGS LQLPPLKKKR NLPGTPDPTA 60 EVVALSPTTL MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLRQRSNA EVKKRVYICP 120 EPSCVHHNPA RALGDLTGIK KHFSRKHGEK KWKCDKCSKK YAVQSDWKAH QKTCGTREYK 180 CDCGTIFSRR DSFITHRAFC DALAEENSKV NQGQQQEKDV AGSNHSHDAQ AVQELISSSL 240 PHFGSFDPKN PLKSMPQELV PMPFRAMNGM FSTSSGTVFS NPRAHSPSTL QLSSISSTSF 300 SSYLQQFGGS TPNAYTSATA LLQKAAQMGA TTASNTINSP MMHKSYNVSN MAGAADQGLM 360 TGYVPVFESQ QQPRQYQSHQ QMLLGGGFGT DQQMLEAATN GSSTAMDEQM SMFSGLFMNG 420 RGGGDPGHSS GGLFRGIEQA ESVGGSSGTN MARPGLSMTD RSMSTFEGHG DLIPTVDFLG 480 VGGSRPPNFH QQQHPQQERF EMEVTNHHQS R*

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MSNLTGEDGS FTSAANSCED DEAHQQRQTQ AAAGSSNDGS LQLPPLKKKR NLPGTPDPTA  60
EVVALSPTTL MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLRQRSNA EVKKRVYICP  120
EPSCVHHNPA RALGDLTGIK KHFSRKHGEK KWKCDKCSKK YAVQSDWKAH QKTCGTREYK  180
CDCGTIFSRR DSFITHRAFC DALAEENSKV NQGQQQEKDV AGSNHSHDAQ AVQELISSSL  240
PHFGSFDPKN PLKSMPQELV PMPFRAMNGM FSTSSGTVFS NPRAHSPSTL QLSSISSTSF  300
SSYLQQFGGS TPNAYTSATA LLQKAAQMGA TTASNTINSP MMHKSYNVSN MAGAADQGLM  360
TGYVPVFESQ QQPRQYQSHQ QMLLGGGFGT DQQMLEAATN GSSTAMDEQM SMFSGLFMNG  420
RGGGDPGHSS GGLFRGIEQA ESVGGSSGTN MARPGLSMTD RSMSTFEGHG DLIPTVDFLG  480
VGGSRPPNFH QQQHPQQERF EMEVTNHHQS R*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-104	C2H2 family protein