PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0045s0309.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 761aa MW: 86432.3 Da PI: 7.0696

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0045s0309.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.4	3.3e-20	59	154	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek...dgkwevtklele 84 +fY+++Ak++GFs+r+++++ + + it+r+f+C + g+++ + ++ + k +r+r+++r+gC+a +++ k+ +w++t +++ Kaladp0045s0309.2.p 59 EFYCSFAKQCGFSIRRHRTRGReGVGRGITRRDFTCHRGGFPQLKPSDdgKLKLQRNRKSSRCGCQAYMRIVKRAdydIPEWRITAFSNV 148 6*************999877355667**********99988866778899**********99887665679***** PP FAR1 85 HnHela 90 HnHel Kaladp0045s0309.2.p 149 HNHELL 154 **96 PP

Sequence ? help Back to Top
Protein Sequence Length: 761 aa Download sequence
MSELASAVKE ASENATGSSP DDIGTIEEMP EDTILSRQTS VSLVPCIGQR FVSQDAAYEF 60 YCSFAKQCGF SIRRHRTRGR EGVGRGITRR DFTCHRGGFP QLKPSDDGKL KLQRNRKSSR 120 CGCQAYMRIV KRADYDIPEW RITAFSNVHN HELLKTTEVQ LLPAYCTISP DDKSRICMFS 180 KAGMSVRQML RLLELEKGVK LGSLPFTEVD VRNLLQSFRS IDGDNDAIDL LTICKNRKDK 240 EHDFKYDFKM DANNRLEHIA WSYPSCIQSY ETFGDCVIFD TTHRLDAYDM LLGLWVGVDN 300 HGMSCLFGCV LLRDENVQSF AWALKSFSGF MNNKSPQTLL TDENMWLKDA VSVEMPQTKH 360 AFCIWHITAK FSDWFSGMLG SLYDKWKADL QLLYNLQCVE DFEVGWLDMV NTYGLHGNKH 420 ISSLYALRTF WALPYLRGYF FAGMTKAFHS ESINAYTQRF LSVQSKLVNY VDQVAAIANY 480 KDQIGVKHKM QQKIQKFSLK TGSPIEAHAA SVLTPYAFNI LQEELVLAPQ YASLMVDENY 540 FIVRHHTKLD GGYKVLWSPN DEFISCSCQH FEFCGILCRH VLRVLSTNNC FHIQNQYLPA 600 RWREEPSARS FHQSSSGSDE KACKVQLLKS MVSTLIAQST ETEERLDTAC NQVALLLSRI 660 KGFTGPSVQD DNHIAYPSPS ASLMIPEVED SDSIVQSYSS GPPQDSYSLG KLKERRPRDN 720 MDAYKKRRRC SVPCWGQLEH NAAECQMMSD DLSGDGMGFL *

Sequence ? help Back to Top

Protein Sequence Length: 761 aa Download sequence

MSELASAVKE ASENATGSSP DDIGTIEEMP EDTILSRQTS VSLVPCIGQR FVSQDAAYEF  60
YCSFAKQCGF SIRRHRTRGR EGVGRGITRR DFTCHRGGFP QLKPSDDGKL KLQRNRKSSR  120
CGCQAYMRIV KRADYDIPEW RITAFSNVHN HELLKTTEVQ LLPAYCTISP DDKSRICMFS  180
KAGMSVRQML RLLELEKGVK LGSLPFTEVD VRNLLQSFRS IDGDNDAIDL LTICKNRKDK  240
EHDFKYDFKM DANNRLEHIA WSYPSCIQSY ETFGDCVIFD TTHRLDAYDM LLGLWVGVDN  300
HGMSCLFGCV LLRDENVQSF AWALKSFSGF MNNKSPQTLL TDENMWLKDA VSVEMPQTKH  360
AFCIWHITAK FSDWFSGMLG SLYDKWKADL QLLYNLQCVE DFEVGWLDMV NTYGLHGNKH  420
ISSLYALRTF WALPYLRGYF FAGMTKAFHS ESINAYTQRF LSVQSKLVNY VDQVAAIANY  480
KDQIGVKHKM QQKIQKFSLK TGSPIEAHAA SVLTPYAFNI LQEELVLAPQ YASLMVDENY  540
FIVRHHTKLD GGYKVLWSPN DEFISCSCQH FEFCGILCRH VLRVLSTNNC FHIQNQYLPA  600
RWREEPSARS FHQSSSGSDE KACKVQLLKS MVSTLIAQST ETEERLDTAC NQVALLLSRI  660
KGFTGPSVQD DNHIAYPSPS ASLMIPEVED SDSIVQSYSS GPPQDSYSLG KLKERRPRDN  720
MDAYKKRRRC SVPCWGQLEH NAAECQMMSD DLSGDGMGFL *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein