PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0045s0494.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 642aa MW: 69450.9 Da PI: 6.1508

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0045s0494.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.3	2e-30	390	448	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Kaladp0045s0494.1.p 390 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILVTTYEGNHNHP 448 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 642 aa Download sequence
MATKAGFSSS GLSIDSDPFS SSSSPPIQHH LFFHPPPPPP PPHIHYMEST TTATSAQSKA 60 SWSNPSPTIQ FPLNLNYTSP DEHQPQDDDH GDIKFIHDDL RLSSDNEDHP HNRVINEMDF 120 FAVADHNKKK LIMNEEGGSS KLAAPTDFDP QNATTKDPLH GSTQDFNNVY TGLHLLTANT 180 SSTDQSVVDD GSSPASDDAR AKNEIVMLQA EIERMNKENQ RLKDMLSHVS NNYSAMQVHL 240 MKLGDSQKKD ARDQQQLQMI AQEHQKEDQQ QMLGGSPQLV VQKQLMDLGL APASDIHDQQ 300 SLSSSENHED GRSNSSPTNL EAASKLQVEE AREQIRMGMG REGEAAHGLP NKVPKFNPSK 360 SNADQASSTE ATMRKARVSV RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG 420 CPVRKQVQRC AEDRTILVTT YEGNHNHPLP PAAMAMASTT SSAARMLLSG SMSSADGLMN 480 PNFLARTLLP CSSNMATISA SAPFPTVTLD LTLNPNATQP LPNTLTQIQS QFQNPSQNLP 540 LLPQILTQAL YSHSKFSGLH MSQNDMDSSS LAPKQQGSLA DSLTAASAAI AADPNFTAVI 600 AAAISSFIGN SHPSNNVTNN STNSNTDSGA NIVNSSSFPE N*

Sequence ? help Back to Top

Protein Sequence Length: 642 aa Download sequence

MATKAGFSSS GLSIDSDPFS SSSSPPIQHH LFFHPPPPPP PPHIHYMEST TTATSAQSKA  60
SWSNPSPTIQ FPLNLNYTSP DEHQPQDDDH GDIKFIHDDL RLSSDNEDHP HNRVINEMDF  120
FAVADHNKKK LIMNEEGGSS KLAAPTDFDP QNATTKDPLH GSTQDFNNVY TGLHLLTANT  180
SSTDQSVVDD GSSPASDDAR AKNEIVMLQA EIERMNKENQ RLKDMLSHVS NNYSAMQVHL  240
MKLGDSQKKD ARDQQQLQMI AQEHQKEDQQ QMLGGSPQLV VQKQLMDLGL APASDIHDQQ  300
SLSSSENHED GRSNSSPTNL EAASKLQVEE AREQIRMGMG REGEAAHGLP NKVPKFNPSK  360
SNADQASSTE ATMRKARVSV RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG  420
CPVRKQVQRC AEDRTILVTT YEGNHNHPLP PAAMAMASTT SSAARMLLSG SMSSADGLMN  480
PNFLARTLLP CSSNMATISA SAPFPTVTLD LTLNPNATQP LPNTLTQIQS QFQNPSQNLP  540
LLPQILTQAL YSHSKFSGLH MSQNDMDSSS LAPKQQGSLA DSLTAASAAI AADPNFTAVI  600
AAAISSFIGN SHPSNNVTNN STNSNTDSGA NIVNSSSFPE N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-111	WRKY family protein