PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0527.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YB
Protein Properties Length: 174aa    MW: 17999.9 Da    PI: 6.3553
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0527.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB186.42e-5823118297
                NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 
                          reqdr+lPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplkvyl+kyr
  Kaladp0045s0527.1.p  23 REQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQKYR 112
                          89**************************************************************************************** PP

                NF-YB  92 elegek 97 
                          e+egek
  Kaladp0045s0527.1.p 113 EMEGEK 118
                          ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MADSDNDSGG NANGGSGGEL SAREQDRLLP IANVSRIMKK ALPANAKISK DAKETVQECV  60
SEFISFITGE ASDKCQREKR KTINGDDLLW AMTTLGFEEY VEPLKVYLQK YREMEGEKSA  120
GGRQGDKDGG GGSSSSSLGG GGGGGGFSGG GGGMYGGGMM IMGGGHPHHH HQR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-67NF-YB family protein