PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0046s0329.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 335aa MW: 35501.7 Da PI: 8.2883

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0046s0329.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110	3.4e-34	85	175	2	91
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgka 90 a+++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai e+tgt++ +a ++ ++ + + +sssg++ Kaladp0046s0329.1.p 85 ATGRRSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIYEATGTGTVPAIAVsVGGTLKIPTTTSSSGES 174 67899***********************************************************88888444322222222222222222 PP TCP 91 a 91 + Kaladp0046s0329.1.p 175 S 175 2 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MNHHHRQIDP ENDEDDDGAD ASDLSKSTGA KNNGCSNGDS KLYPETLSFR SHLLKQEPSD 60 SDHFRQHSRS FGMVPVPMQM PVTVATGRRS TKDRHTKVEG RGRRIRIPAT CAARIFQLTR 120 ELGHKSDGET VRWLLEHAEQ AIYEATGTGT VPAIAVSVGG TLKIPTTTSS SGESSVKKMK 180 RPSTSEFYDV SVSSGLRHVA MSPIPQGLVP IWAVGNPPGM NAVAAGGFWM IRQPPAMPAA 240 TSSQPQLWTI SPSVTPVFNM AGGPDPADVI APSSALDSSL VGASKSSKQL TTMAPSHSSS 300 SSASKTQMAV EIYDRGEALQ LQLMGGSSSP HSSS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	4e-57	TCP family protein