PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0046s0337.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 245aa    MW: 27504.4 Da    PI: 5.7457
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0046s0337.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.1e-1867117155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          + y+GVr++  ++rWv+e+r+p   +k+ r++lg++ tae+Aa+a++ a+++++g
  Kaladp0046s0337.1.p  67 PVYRGVRRRN-SNRWVCEVREP---NKKNRIWLGTYPTAEMAARAHDVAALAFRG 117
                          68*****888.8******9998...3369**********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDVFSQYSDP LPFSSLYSQS TDQRDNSSVS DSRIGRTRSY SDEDIMLASS HPKKRAGRKK  60
FRETRHPVYR GVRRRNSNRW VCEVREPNKK NRIWLGTYPT AEMAARAHDV AALAFRGLKS  120
CLNFADSAWR LPVPASTDAA DIQRAAAEAA EMFRTPEDTD NLNKGNIVCT MGEASSGNNK  180
NEPNRQTQQG TSYYVDEEAI FDMPGLLNNM AEGLLLPPPS FLDGEFTWDN AENDTDLTLW  240
NHSI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.15e-65ERF family protein