PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0047s0062.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 244aa    MW: 25862.9 Da    PI: 8.61
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0047s0062.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.0004394116123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ykC+ C+k F++   L  H  +H
  Kaladp0047s0062.1.p  94 YKCSVCHKAFPSYQALGGHKASH 116
                          9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MALEALNSPS AAHQMRFEGT EHHLFDKMSK GKRSKRSRSD TGSQIANGAE EEYLAWCLIM  60
LARGVSGRAE SALEVKQSTP LPPQPPAVVL NLSYKCSVCH KAFPSYQALG GHKASHRKNP  120
ATPDTDSSAS TVTAPAFPPS ALNPSGRSHQ CTICHKSFPT GQALGGHKRC HYDGGNSSSA  180
VVTASSDAAG SSHGFDLNLP AQPEMFPGAV VNAWKSQRAV EEEVESPHPS KKPRVFDLGL  240
GQH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-43C2H2 family protein