PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0047s0076.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 222aa    MW: 23377.6 Da    PI: 9.893
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0047s0076.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF59.63.9e-1982128349
                          --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
               SRF-TF   3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 
                           e +sn  vtfskR+  +lKKA+EL++LC+++ a+++fs+ gk++ +
  Kaladp0047s0076.1.p  82 MEKESNMLVTFSKRKSNLLKKANELCTLCGVKCAIVVFSPAGKVFSF 128
                          578999**************************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MASSSNNPIA NSTVPFTTSS TDVVPNPNTS SSSVAIASPT DVPPPPPVAP STAAVPPPDV  60
PSLSTSGRKK SKGRGKIEMR KMEKESNMLV TFSKRKSNLL KKANELCTLC GVKCAIVVFS  120
PAGKVFSFGH PSVDQVTDRY LNGILNPTPS PPPPNQVPQN PSEGQHQAGT DIVQTLSAEL  180
SKLTSLLEAS KKHGQALDER RAARMATNWN EEVKALLDGL L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-30M-type_MADS family protein