PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0047s0147.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 373aa MW: 42329.9 Da PI: 6.7589

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0047s0147.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.4e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H Kaladp0047s0147.1.p 106 YVCHyeGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP
2	zf-C2H2	22.3	3.4e-07	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ykCp Cgk Fs nLk+H++tH Kaladp0047s0147.1.p 136 YKCPheGCGKAFSLDFNLKSHMKTH 160 9***********************9 PP
3	zf-C2H2	14.3	0.00012	167	190	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 Cp Cgk++ + + L++H+++H Kaladp0047s0147.1.p 167 LCPfpECGKRYAHEYKLNNHLSSH 190 59999******************6 PP
4	zf-C2H2	14.5	0.0001	230	254	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y Cp C+k + + + L+ H+r+H Kaladp0047s0147.1.p 230 YACPydGCDKAYIHEYKLNLHLRNH 254 89**********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MEPHAGYGLF DNRRPMGYNP RAPAVRWVKE WVPQEVVATG GKCSLLKWVN EHTLKALRER 60 ENEIDAAEPE PTTEVLFLCS FEGCGKTFFD VGALRKHAHI HGERQYVCHY EGCGKKFLDS 120 SKLKRHFLIH TGERAYKCPH EGCGKAFSLD FNLKSHMKTH SQDNYYLCPF PECGKRYAHE 180 YKLNNHLSSH HDKVEPELPK YMATPVAEKP PKPSKPAPTP SSQPSSDRPY ACPYDGCDKA 240 YIHEYKLNLH LRNHHPNHFA DENADQDEAD EPGSQNVYSS KRASTKRQKP SKAQPPKSGA 300 KTSSSKSAKR KASAPAAPVV VKKPWPVKEE PNREEDSEET EEDRDNVEGG WRYQENNNMD 360 DDEGDEETED EN*

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MEPHAGYGLF DNRRPMGYNP RAPAVRWVKE WVPQEVVATG GKCSLLKWVN EHTLKALRER  60
ENEIDAAEPE PTTEVLFLCS FEGCGKTFFD VGALRKHAHI HGERQYVCHY EGCGKKFLDS  120
SKLKRHFLIH TGERAYKCPH EGCGKAFSLD FNLKSHMKTH SQDNYYLCPF PECGKRYAHE  180
YKLNNHLSSH HDKVEPELPK YMATPVAEKP PKPSKPAPTP SSQPSSDRPY ACPYDGCDKA  240
YIHEYKLNLH LRNHHPNHFA DENADQDEAD EPGSQNVYSS KRASTKRQKP SKAQPPKSGA  300
KTSSSKSAKR KASAPAAPVV VKKPWPVKEE PNREEDSEET EEDRDNVEGG WRYQENNNMD  360
DDEGDEETED EN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-101	C2H2 family protein