PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0047s0263.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 412aa MW: 45208.7 Da PI: 6.5771

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0047s0263.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.6	4.1e-15	153	212	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g Kaladp0047s0263.1.p 153 SQFRGVTRHRWTGRYEAHLWDnSCRkEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 212 789****************655454477446***********************98 PP
2	AP2	48.7	1.9e-15	255	306	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Kaladp0047s0263.1.p 255 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 306 78**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MTDGDGARGA PRLENLLGCR YPNTDSLVEE CKASDEAYQT DLNFGQIGDL FGSYSDGGGD 60 GGDNGYGGVP FDGATSVSGL KSLMRLHPCS GCFYCEKSDN GVEPSDNLLA LCTSNGTSLG 120 SELSDHRKRA VEASAAVEPV PRKNTDTFGQ RTSQFRGVTR HRWTGRYEAH LWDNSCRKEG 180 QSRKGRQVYL GGYDKEEKAA RAYDLAALKY WGSTTHTNFP LVNYEKEVEE MKNLTRHEYV 240 ANLRRKSSGF SRGASVYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA 300 AIKFRGTSAV TNFDISRYDV KRICSSSTLI TNDSAKSKDS NPNSPEEDQC ENGSSCASSA 360 SAKHIIPVPT APHLSTDLCW SDDCIQSSRL SPIVYLDSYN EFQTARTGYM D*

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MTDGDGARGA PRLENLLGCR YPNTDSLVEE CKASDEAYQT DLNFGQIGDL FGSYSDGGGD  60
GGDNGYGGVP FDGATSVSGL KSLMRLHPCS GCFYCEKSDN GVEPSDNLLA LCTSNGTSLG  120
SELSDHRKRA VEASAAVEPV PRKNTDTFGQ RTSQFRGVTR HRWTGRYEAH LWDNSCRKEG  180
QSRKGRQVYL GGYDKEEKAA RAYDLAALKY WGSTTHTNFP LVNYEKEVEE MKNLTRHEYV  240
ANLRRKSSGF SRGASVYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA  300
AIKFRGTSAV TNFDISRYDV KRICSSSTLI TNDSAKSKDS NPNSPEEDQC ENGSSCASSA  360
SAKHIIPVPT APHLSTDLCW SDDCIQSSRL SPIVYLDSYN EFQTARTGYM D*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-120	AP2 family protein